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马 涛
作者: user -- 发布时间:2016/6/10 15:28:47

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马涛,副研究员,博士

 

学习和工作经历:

2014/08 -- 至今:四川大学,生命科学学院,副研究员

2009/09-2014/06:兰州大学,生命科学学院,博士学位

2005/09-2009/06:兰州大学,生命科学学院,学士学位

 

研究方向:进化基因组学、群体遗传学、生物信息学

 

研究领域:

以林木物种为研究对象,利用基因组和群体遗传学数据,研究物种的系统发育关系、种群动态历史、物种形成过程中基因组水平上的分化水平和分化模式,重点挖掘其环境适应性分化、生殖隔离的基因组学遗传基础,解析其适应性进化的遗传学机制;利用转录组、代谢组等多组学交叉数据,构建林木物种次生代谢产物的合成途径和转录调控网络,通过物种间大尺度的组学比较分析,深入解析其代谢网络的起源、分化和适应性进化意义。

 

发表论文:

Kun Wang#, Yongzhi Yang#, Lizhong Wang, Tao Ma, Huiying Shang, Luming Ding, Jin Han, Qiang Qiu*. Different gene expressions between cattle and yak provide insights into high-altitude adaptation. Animal genetics 47(1): 28-35, 2016.

Qiang Qiu#, Lizhong Wang#, Kun Wang#, Yongzhi Yang#, Tao Ma, Zefu Wang, Xiao Zhang, Zhengqiang Ni, Fujiang Hou, Ruijun Long, Richard Abbott, Johannes Lenstra, Jianquan Liu*. Yak whole-genome resequencing reveals domestication signatures and prehistoric population expansions. Nature communications 6, 2015.

Zefu Wang#, Tao Ma#, Jianchao Ma, Jin Han, Luming Ding, Qiang Qiu*. Convergent evolution of SOCS4 between yak and Tibetan antelope in response to high-altitude stress. Gene 572(2): 298-302, 2015.

Caihua Zhang#, Tao Ma#, Wenchun Luo, Jianmei Xu, Jianquan Liu, Dongshi Wan*. Identification of 4CL Genes in Desert Poplars and Their Changes in Expression in Response to Salt Stress. Genes 6(3): 901-917, 2015.

Xinyi Guo, Guoqian Hao, Tao Ma*. The complete chloroplast genome of salt cress (Eutrema salsugineum). Mitochondrial DNA 1-2, 2015.

Guoqian Hao, Hao Bi, Yuanshuo Li, Qi He, Yazhen Ma, Xinyi Guo, Tao Ma*. The whole chloroplast genomes of two Eutrema species (Brassicaceae). Mitochondrial DNA 1-2, 2015.

Qi He, Guoqian Hao, Xiaojuan Wang, Hao Bi, Yuanshuo Li, Xinyi Guo, Tao Ma*. The complete chloroplast genome of Schrenkiella parvula (Brassicaceae). Mitochondrial DNA 1-2, 2015.

Yuanshuo Li, Hao Bi, Bingbing Liu, Xinyi Guo, Guoqian Hao, Qi He, Tao Ma*. The complete chloroplast genome of Ostrya rehderiana. Mitochondrial DNA 1-2, 2015.

Ting Xu, Tao Ma, Quanjun Hu, Jianquan Liu. An integrated database of wood-formation related genes in plants. Scientific reports 5, 2015.

Yazhen Ma, Ting Xu, Dongshi Wan, Tao Ma, Sheng Shi, Jianquan Liu, Quanjun Hu. The salinity tolerant poplar database (STPD): a comprehensive database for studying tree salt-tolerant adaption and poplar genomics. BMC genomics 16, 2015.

Jian Zhang, Dechun Jiang, Bingbing Liu, Wenchun Luo, Jing Lu, Tao Ma, Dongshi Wan. Transcriptome dynamics of a desert poplar (Populus pruinosa) in response to continuous salinity stress. Plant cell reports 33(9): 1565-1579, 2014.

Tao Ma#, Junyi Wang#, Gongke Zhou#, Zhen Yue, Quanjun Hu, Yan Chen, Bingbing Liu, Qiang Qiu, Zhuo Wang, Jian Zhang, Kun Wang, Dechun Jiang, Caiyun Gou, Lili Yu, Dongliang Zhan, Ran Zhou, Wenchun Luo, Hui Ma, Yongzhi Yang, Shengkai Pan, Dongming Fang, Yadan Luo, Xia Wang, Gaini Wang, Juan Wang, Qian Wang, Xu Lu, Zhe Chen, Jinchao Liu, Yao Lu, Ye Yin, Huanming Yang, Richard J Abbott, Yuxia Wu, Dongshi Wan, Jia Li, Tongming Yin, Martin Lascoux, Stephen P DiFazio, Gerald A Tuskan, Jun Wang, Jianquan Liu*. Genomic insights into salt adaptation in a desert poplar. Nature communications 4, 2013.

Qiang Qiu#, Guojie Zhang#, Tao Ma#, Wubin Qian#, Junyi Wang#, Zhiqiang Ye#, Changchang Cao, Quanjun Hu, Jaebum Kim, Denis M Larkin, Loretta Auvil, Boris Capitanu, Jian Ma, Harris A Lewin, Xiaoju Qian, Yongshan Lang, Ran Zhou, Lizhong Wang, Kun Wang, Jinquan Xia, Shengguang Liao, Shengkai Pan, Xu Lu, Haolong Hou, Yan Wang, Xuetao Zang, Ye Yin, Hui Ma, Jian Zhang, Zhaofeng Wang, Yingmei Zhang, Dawei Zhang, Takahiro Yonezawa, Masami Hasegawa, Yang Zhong, Wenbin Liu, Yan Zhang, Zhiyong Huang, Shengxiang Zhang, Ruijun Long, Huanming Yang, Jian Wang, Johannes A Lenstra, David N Cooper, Yi Wu, Jun Wang, Peng Shi, Jianquan Liu*. The yak genome and adaptation to life at high altitude. Nature genetics 44(8): 946-949, 2012.

Quanjun Hu, Tao Ma, Kun Wang, Ting Xu, Jianquan Liu, Qiang Qiu. The Yak genome database: an integrative database for studying yak biology and high-altitude adaption. BMC genomics 13, 2012.

Qiang Qiu#, Tao Ma#, Quanjun Hu, Bingbing Liu, Yuxia Wu, Haihong Zhou, Qian Wang, Juan Wang, Jianquan Liu*. Genome-scale transcriptome analysis of the desert poplar, Populus euphratica. Tree Physiology: tpr015, 2011.

Zhaofeng Wang, Takahiro Yonezawa, Bin Liu, Tao Ma, Xin Shen, Jianping Su, Songchang Guo, Masami Hasegawa, Jianquan Liu. Domestication relaxed selective constraints on the yak mitochondrial genome. Molecular biology and evolution 28(5): 1553-1556, 2011.

 


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